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1) Determination of molecular mass of proteins and peptides by MALDI-TOF

2) Protein identification by fingerprinting

- Enzymatic digestion (automatic or manual) with trypsin of proteins obtained from SDS-PAGE 1D or 2D gels. Digestion can be also carried out in-solution.

- Analysis of the digest by mass spectrometry (MALDI-TOF) in order to provide a fingerprinting spectrum

- Search in databases to identify the protein

3) Protein identification by fingerprinting and peptide fragmentation by MALDI tandem Time-Of-Flight mass spectrometry (MALDI-TOF/TOF)

· Enzymatic digestion (automatic or manual) with trypsin of proteins obtained from SDS-PAGE 1D or 2D gels. Digestion can also be carried out in-solution.

· Analysis of the digest by mass spectrometry (MALDI-TOF) in order to provide a fingerprinting spectrum.

· Automatic peptide sequencing (1 to 3 peptides) (MS/MS).

· Search and identification of a protein by fingerprinting (data MS), by peptide sequencing (data MS/MS) or combined analysis (MS +MS/MS).·

- Automatic search and identification by GPS (Global Proteome Server) system connected to MALDI-TOF/TOF instrument


4) Peptide Sequencing

· Peptide sequencing by MALDI-TOF/TOF mass spectrometer

· Peptide sequencing by HPLC-Q-TOF. Soon available!!.

 

 

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Genomic and Proteomic Center
Proteomic Service Facility

Facultad de Farmacia - UCM - Pza Ramón y Cajal s/n
28040 Madrid

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